Signatures of hydrophobic collapse in extended proteins captured with force spectroscopy
Publication Date:
May, 2007
Journal:
Proceedings of the National Academy of Sciences
Abstract:
We unfold and extend single proteins at a high force and then
linearly relax the force to probe their collapse mechanisms. We
observe a large variability in the extent of their recoil. Although
chain entropy makes a small contribution, we show that the
observed variability results from hydrophobic interactions with
randomly varying magnitude from protein to protein. This collapse
mechanism is common to highly extended proteins, including
nonfolding elastomeric proteins like PEVK from titin. Our observations
explain the puzzling differences between the folding
behavior of highly extended proteins, from those folding after
chemical or thermal denaturation. Probing the collapse of highly
extended proteins with force spectroscopy allows separation of
the different driving forces in protein folding.
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